Well now, all are good answer. But, there is a all in one vulnerability scanning tool i.e. (vunerability). Rapid7, is the best tool for performing a vulnerability assessment. It will scan data bases, web servers, platforms, network devices, operating systems, and applications etc.. Now with that being said, it will find the low hanging fruit. Rapid7 purchased Metasploit Pentester frame-working tool. You can perform a pentest of all results from your Rapid7 scans. You can use the open source version or the paid version. If its for a company I suggest using the commercial brand.

Senior Security Engineer CISSP/SSCP/MCSE/TCSE
WILLIAM CRAIG

On Nov 17, 2012, at 9:26 AM, Marcin R <kaktus9news (at) gmail (dot) com [email concealed]> wrote:

> Hello,
> I wholeheartedly recommend NESSUS also, it has highly customizable
> scan options, can scan multiple targets at once, and is free for
> evaluation purposes
> Threats are grouped according to type and colored according to severity
> NESSUS 5 [version i am using] also provides solutions to detected
> vulnerabilities in their descriptions where possible
>
> Regards
>
> Marcin Kowalczyk
>
> 2012/11/14 <mdaa.uae (at) gmail (dot) com [email concealed]>:
>> Dear All
>>
>> Is there anyone can refer me to vulnerability solution tool that can scan the system which consists of applications,database and web.the solution should provide detailed information regarding all the layers in the enterprise systems.
>>
>> Thank you
>>
>> Mohamed
>>
>>
>>
>>
>>
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>
>
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